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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821316.1_cds_XP_016500726.1_14529
CDS Infomation

[gene=LOC107819151] [db_xref=GeneID:107819151] [protein=extradiol ring-cleavage dioxygenase-like] [protein_id=XP_016500726.1] [location=complement(join(38480..38681,39780..40147,41220..41468))] [gbkey=CDS]
Sequence

ATGGCTTTGCCTTTGAAATTGAAGGAGACGTTCTTCATATCACATGGATCCCCTACGCTT
TCTATAGATGAGTCTTTGCCCGCCAGGCACTTCTTGAAAGGCTTTAGAGAAAGATTTTTA
AATCAAAAGCCGAATGCGATATTGATGATTTCTGCTCATTGGGAAACTTCTGAACCAACT
GTTAATTCTATTCGTGGCCGCCATGATACCATTCATGACTTCTACGGCTTCCCTAAACCC
ATGTACCAGCTCAGTTACCCTGCACCAGGAGCTCCAGAATTGGCTAAAAGGGTGAAGGAA
GTTCTCACGGCATCAGGGTTCAAGACGGTGCACGAAGACAAAAAACGTGGTTTGGACCAT
GGTGCATGGGTCCCTCTCATGCTCATGTACCCGGAAGCAGACATTCCAGTCTGCCAGCTC
TCGGTCCAGCCCAACAAGGATGGTACTTATCATTACAACATGGGAAGAGCATTGGCCTCC
CTCAAGGATGAAGGTGTCCTCATAATTGGGTCTGGATCTGCCACTCACAACTTAAGGGCT
CTTGGTTCATCCAAAAGTGTTGTTTCTTGGGCTTTAGAGTTTGACAATTGGCTAAAAGAC
GCCCTTCTCAGTGGAAGGCATCAAGATGTTAATAACTATGACATGAAGGCTCCGCATGCA
AAAGTTGCACATCCATGGCCCGAGCACATCTATCCATTACATGTTGCGCTAGGTGCTTCT
GGTGAAGGCACAAATGGAGAGCTTATTCACCACAGCTGGGATCTTGGTGCACTTTCTTAT
GCTTCCTACAAGTTTTCTAGCCTGACTAGGCCTTCATAG

Peptide Sequence

PEP ID

XP_016500726.1
PEP Infomation

PREDICTED: extradiol ring-cleavage dioxygenase-like [Nicotiana tabacum]
Sequence

MALPLKLKETFFISHGSPTLSIDESLPARHFLKGFRERFLNQKPNAILMISAHWETSEPT
VNSIRGRHDTIHDFYGFPKPMYQLSYPAPGAPELAKRVKEVLTASGFKTVHEDKKRGLDH
GAWVPLMLMYPEADIPVCQLSVQPNKDGTYHYNMGRALASLKDEGVLIIGSGSATHNLRA
LGSSKSVVSWALEFDNWLKDALLSGRHQDVNNYDMKAPHAKVAHPWPEHIYPLHVALGAS
GEGTNGELIHHSWDLGALSYASYKFSSLTRPS

Transcript Sequence

Gene sequence data has not been registered.